Archive For October 22, 2015

aligning text in vim

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Lately, i’ve been pulling out rnaseq reads and trying to build contings by hand in a quick and dirty manner by

A nifty trick is to use vim to line up your strings on MYSTRING. I did this using the tabularize.vim plugin.

This basically says, line up all lines on TACCAT. Everything before…

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Viewing source code for S3/S4 objects

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It’s not always easy to see the source code for functions in R/BioC. For S4 method dispatch, you need to figure out the function signature, then call selectMethod() or getMethod() getMethod = selectMethod   For example:

  For S3 dispatch, you can call

  to get a list of dispatch methods and then…

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